Survival-associated eQTLs across different cancer types
We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.
|
Cancer type
|
SNP ID
|
SNP position (hg19)
|
Alleles (A/a)
|
log-rank test p-value
|
Sample size
|
Median survival time AA
|
Median survival time Aa
|
Median survival time aa
|
|
|---|---|---|---|---|---|---|---|---|---|
| KIRP | rs17439752 | chr9:72435713 | C/G | 0 | 214 | 14.03 | 19.27 | 6.7 | KM Plot |
| KIRP | rs17470673 | chr10:70649244 | A/G | 7.42E-9 | 214 | 14.85 | 19.5 | 9.77 | KM Plot |
| KIRP | rs17471063 | chr10:70685241 | T/G | 6.91E-9 | 214 | 15.07 | 17 | 10.6 | KM Plot |
| KIRP | rs17471610 | chr10:70730197 | C/G | 8.57E-9 | 213 | 14.87 | 18.03 | 9.77 | KM Plot |
| KIRP | rs17518030 | chr9:72427646 | G/C | 0 | 211 | 14.03 | 18.87 | 6.7 | KM Plot |
| KIRP | rs17518268 | chr9:72435431 | G/C | 0 | 209 | 15.33 | 17 | 6.7 | KM Plot |
| KIRP | rs17555825 | chr10:70670573 | C/G | 7.43E-9 | 214 | 9.77 | 18.77 | 14.87 | KM Plot |
| KIRP | rs17630952 | chr10:75601414 | T/A | 1.65E-11 | 213 | 16.73 | 16.45 | 5.57 | KM Plot |
| KIRP | rs17631000 | chr10:75602500 | C/T | 2.22E-6 | 214 | 6.13 | 18.02 | 15.1 | KM Plot |
| KIRP | rs17631059 | chr10:75625558 | G/C | 3.75E-6 | 209 | 15.88 | 18.72 | 5.57 | KM Plot |
| KIRP | rs17637953 | chr10:82426023 | G/T | 7.64E-6 | 214 | 16.93 | 12 | 2.85 | KM Plot |
| KIRP | rs17666978 | chr1:212716491 | T/C | 3.22E-7 | 214 | 16.43 | 16.53 | 10.63 | KM Plot |
| KIRP | rs17695758 | chr6:27837183 | T/C | 1.98E-7 | 214 | 16.47 | 12.8 | 9.77 | KM Plot |
| KIRP | rs17730369 | chr10:102016590 | C/G | 6.35E-6 | 213 | 16.43 | 22.77 | 3.6 | KM Plot |
| KIRP | rs17749927 | chr6:27669976 | A/G | 1.98E-7 | 213 | 16.45 | 15.02 | 9.77 | KM Plot |